Nereocystis luetkeana
Near chromosome scale assembly
Description
- Genus: Nereocystis
- Species: luetkeana
- Strain: NB12FB3
- Sex: Unknown
- Ploidy: Unknown
- Common name: bull kelp
Resources
-
Download Nereocystis luetkeana archive (Not yet available)
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection (Not yet available)
- Publications:
World occurrences (from GBIF)
Assembly
- Sequencing: PacBio
- Size: 449.79 Mbp
- Number of contigs: 1561
- GC content: 50.6%
- N content: 0%
- N50: 10.97 Mbp
- L50: 16
Annotation
- Protein-coding genes: 22952
- Gene length (average): 8311.31
- Gene length (median): 5875.0
- CDS length (average): 1138.85
- CDS length (median): 809.0
- CDS proportion (genome): 5.81%
- Genes without introns: 3589
- Number of contigs with at least one gene (genome): 11.08%
- Number of contigs with at least one gene (bases): 92.68%
BUSCO results (BUSCO v3 with eukaryota_odb9 set)
Genome
- Single-copy genes: 185
- Duplicated genes: 1
- Fragmented genes: 26
- Missing genes: 43
Proteins
- Single-copy genes: 198
- Duplicated genes: 0
- Fragmented genes: 24
- Missing genes: 33