Phaeosaccion multiseriatum
Near chromosome scale assembly
Description
- Genus: Phaeosaccion
- Species: multiseriatum
- Strain: PmnI PH 14-01
- Sex: Unknown
- Ploidy: Unknown
- Common name: No common name known
Resources
-
Download Phaeosaccion multiseriatum archive (Not yet available)
- Genome browser (Not yet available)
- GGA: Galaxy Genome Annotation (Not yet available)
- AlgaeBase ↵
- WORMS ↵
- NCBI ↵
- Roscoff Culture Collection ↵
Assembly
- Sequencing: Illumina, Nanopore, Hi-C
- Size: 67.14 Mbp
- Number of contigs: 22
- GC content: 58.3%
- N content: 0%
- N50: 3.94 Mbp
- L50: 7
Annotation
- Protein-coding genes: 19450
- Gene length (average): 2790.05
- Gene length (median): 2082.0
- CDS length (average): 1149.77
- CDS length (median): 879.0
- CDS proportion (genome): 33.3%
- Genes without introns: 4512
- Number of contigs with at least one gene (genome): 100.0%
- Number of contigs with at least one gene (bases): 100.0%
BUSCO results (BUSCO v3 with eukaryota_odb9 set)
Genome
- Single-copy genes: 250
- Duplicated genes: 3
- Fragmented genes: 13
- Missing genes: 37
Proteins
- Single-copy genes: 255
- Duplicated genes: 10
- Fragmented genes: 19
- Missing genes: 19