Phaeothamnion wetherbeei
Draft genome
Description
- Genus: Phaeothamnion
- Species: wetherbeei
- Strain: SAG 119.79
- Sex: Unknown
- Ploidy: Unknown
- Common name: No common name known
Resources
Assembly
- Sequencing: Illumina, Nanopore
- Size: 78.71 Mbp
- Number of contigs: 42337
- GC content: 61.2%
- N content: 0%
- N50: 3.22 Kbp
- L50: 6824
Annotation
- Protein-coding genes: 26911
- Gene length (average): 1176.18
- Gene length (median): 777.0
- CDS length (average): 788.88
- CDS length (median): 606.0
- CDS proportion (genome): 22.4%
- Genes without introns: 17105
- Number of contigs with at least one gene (genome): 34.3%
- Number of contigs with at least one gene (bases): 55.7%
BUSCO results (BUSCO v3 with eukaryota_odb9 set)
Genome
- Single-copy genes: 122
- Duplicated genes: 4
- Fragmented genes: 70
- Missing genes: 59
Proteins
- Single-copy genes: 132
- Duplicated genes: 4
- Fragmented genes: 74
- Missing genes: 45