You are viewing   Best Assembly  Desmarestia dudresnayi DdudBR16 Monoicous , to access additional genome assemblies for this species, click here

Best Assembly Desmarestia dudresnayi

Draft genome

AlgaeBase

Worms

GGA

GGA

ncbi

Description


  • Genus: Desmarestia
  • Species: dudresnayi
  • Strain: DdudBR16
  • Sex: Monoicous
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Illumina
  • Size: 441.53 Mbp
  • Number of contigs: 90763
  • GC content: 47.9%
  • N content: 0%
  • N50: 9.9 Kbp
  • L50: 12088

Annotation

  • Protein-coding genes: 28809
  • Gene length (average): 2611.85
  • Gene length (median): 1241.0
  • CDS length (average): 816.83
  • CDS length (median): 555.0
  • CDS proportion (genome): 5.3%
  • Genes without introns: 9504
  • Number of contigs with at least one gene (genome): 19.7%
  • Number of contigs with at least one gene (bases): 43.0%

BUSCO results (BUSCO v5 with eukaryota_odb10)

Genome

  • Single-copy genes: 93
  • Duplicated genes: 85
  • Fragmented genes: 45
  • Missing genes: 32

Proteins

  • Single-copy genes: 115
  • Duplicated genes: 64
  • Fragmented genes: 45
  • Missing genes: 31

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >