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Best Assembly Desmarestia dudresnayi

Description


  • Genus: Desmarestia
  • Species: dudresnayi
  • Strain: DdudBR16
  • Sex: Monoicous
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Not communicated
  • Size: 425.03 Mbp
  • Number of contigs: 823
  • GC content: 48.8%
  • N content: 0%
  • N50: 13.23 Mbp
  • L50: 14

Annotation

  • Protein-coding genes: 32769
  • Gene length (average): 7271.31
  • Gene length (median): 2569.0
  • CDS length (average): 1216.11
  • CDS length (median): 913.0
  • CDS proportion (genome): 9.5%
  • Genes without introns: 11953
  • Number of contigs with at least one gene (genome): 73.63%
  • Number of contigs with at least one gene (bases): 99.51%

BUSCO results (BUSCO v3 with eukaryota_odb9 set)

Genome

  • Single-copy genes: 194
  • Duplicated genes: 12
  • Fragmented genes: 25
  • Missing genes: 24

Proteins

  • Single-copy genes: 199
  • Duplicated genes: 19
  • Fragmented genes: 21
  • Missing genes: 16

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >