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Best Assembly Desmarestia herbacea (Male)

Description


  • Genus: Desmarestia
  • Species: herbacea
  • Strain: DmunM
  • Sex: Male
  • Ploidy: Haploid
  • Common name: No common name known

Resources

World occurrences (from GBIF)

Assembly

  • Sequencing: Not communicated
  • Size: 431.43 Mbp
  • Number of contigs: 935
  • GC content: 4819%
  • N content: 0.12%
  • N50: 13.14 Mbp
  • L50: 14

Annotation

  • Protein-coding genes: 16271
  • Gene length (average): 12220.26
  • Gene length (median): 8244.0
  • CDS length (average): 1477.44
  • CDS length (median): 1122.0
  • CDS proportion (genome): 5.0%
  • Genes without introns: 2561
  • Number of contigs with at least one gene (genome): 54.9%
  • Number of contigs with at least one gene (bases): 95.1%

BUSCO results (BUSCO v3 with eukaryota_odb9 set)

Genome

  • Single-copy genes: 205
  • Duplicated genes: 3
  • Fragmented genes: 23
  • Missing genes: 24

Proteins

  • Single-copy genes: 216
  • Duplicated genes: 2
  • Fragmented genes: 19
  • Missing genes: 18

Additional genome assemblies for this species

< !-- World occurences map, based on example found at https://tile.gbif.org/ui/4326/leaflet.html -- >